BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B07SP1|AL425984
(782 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1349 1550 0.0
>3x_Contig1349
Length = 5890
Score = 1550 bits (782), Expect = 0.0
Identities = 782/782 (100%)
Strand = Plus / Plus
Query: 1 gatccttggtcaatctagctctttgacatagccttactagttgtgcgatcgttgtgacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 gatccttggtcaatctagctctttgacatagccttactagttgtgcgatcgttgtgacac 1763
Query: 61 tagggttttcaatcacggaattcaaaagaacaaaccccgtaagaatgcgtaacgagtact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1764 tagggttttcaatcacggaattcaaaagaacaaaccccgtaagaatgcgtaacgagtact 1823
Query: 121 tatttgggaagtcaaaaattgaataaagtctaagacacgccgtcctatattgggccatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 tatttgggaagtcaaaaattgaataaagtctaagacacgccgtcctatattgggccatct 1883
Query: 181 ccagaagcaaatcctccgaccgatctttatccagcatgtggtatagagactttacacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 ccagaagcaaatcctccgaccgatctttatccagcatgtggtatagagactttacacttg 1943
Query: 241 cgtaaagcatggggaacaaaagaagcaagaaatctggtttttgtaagttattaccagatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1944 cgtaaagcatggggaacaaaagaagcaagaaatctggtttttgtaagttattaccagatg 2003
Query: 301 taatagcttcccaaaactgttgatgatccacttcgtattgttccaaatctagcaatggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2004 taatagcttcccaaaactgttgatgatccacttcgtattgttccaaatctagcaatggta 2063
Query: 361 gtatcatgtggacattctggatatacatgagataaagctcgtctgacctttccgtagacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2064 gtatcatgtggacattctggatatacatgagataaagctcgtctgacctttccgtagacg 2123
Query: 421 gtagaagatcccaaactggtttcaaactatcgggaatcgcgaactcctgtgatgctgatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2124 gtagaagatcccaaactggtttcaaactatcgggaatcgcgaactcctgtgatgctgatc 2183
Query: 481 cagaggtatcgctgctattcgcttgcatggaatcgttatctaaaatcgtctgtgaagcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2184 cagaggtatcgctgctattcgcttgcatggaatcgttatctaaaatcgtctgtgaagcca 2243
Query: 541 tttccgacctgtgattggatgtatccctagcttccgatattttcggttggatccgacgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2244 tttccgacctgtgattggatgtatccctagcttccgatattttcggttggatccgacgat 2303
Query: 601 tagccttcataatattactggacgtgtcaccatttatgttgttgctgtcaacgctattat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2304 tagccttcataatattactggacgtgtcaccatttatgttgttgctgtcaacgctattat 2363
Query: 661 taccattgttgcaattgcgcctacttcgtctacttccggttccctttcccaatctctgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2364 taccattgttgcaattgcgcctacttcgtctacttccggttccctttcccaatctctgtt 2423
Query: 721 gtttctgactactattatcgttcttattctgctgctgatgtctttgctgttccaactcta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2424 gtttctgactactattatcgttcttattctgctgctgatgtctttgctgttccaactcta 2483
Query: 781 gt 782
||
Sbjct: 2484 gt 2485
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5241
Number of Sequences: 1807
Number of extensions: 5241
Number of successful extensions: 21
Number of sequences better than 1.0e-20: 1
length of query: 782
length of database: 10,358,551
effective HSP length: 16
effective length of query: 766
effective length of database: 10,329,639
effective search space: 7912503474
effective search space used: 7912503474
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)